SubtiBank SubtiBank
yrvD [2019-02-19 19:04:35]
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yrvD [2019-02-19 19:04:35]

unknown
locus
BSU27630
pI
8.72
mw
12.10 kDa
protein length
107 aa Sequence Blast
gene length
324 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,825,846 2,826,169

    The protein

    [SW|Localization]

  • cell membrane (according to Uniprot)

    • Expression and Regulation

    Operons

    genes
    [gene|4AF865F1E16187F89C1FE19BAE5C2CF2C0A53E4A|yrvC]-[gene|418A95E9DD8DE2690C1E65E2A4198E5C5AC6E6D3|yrvD]
    description
    [Pubmed|22383849]
    view in new tab

    genes
    [gene|418A95E9DD8DE2690C1E65E2A4198E5C5AC6E6D3|yrvD]
    description
    [Pubmed|15241682]
    view in new tab

    Biological materials

    Mutant

  • MGNA-B517 (yrvD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1516 NBRP B. subtilis, Japan]
  • GP2099 (''[gene|4AF865F1E16187F89C1FE19BAE5C2CF2C0A53E4A|yrvC]-[gene|418A95E9DD8DE2690C1E65E2A4198E5C5AC6E6D3|yrvD]''::''zeo''), available in [SW|Jrg Stlke]'s lab
  • BKE27630 ([gene|418A95E9DD8DE2690C1E65E2A4198E5C5AC6E6D3|yrvD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTCTTTTCCCCCAAAC, downstream forward: _UP4_TAGTTTTCGAATATTATTTG
  • BKK27630 ([gene|418A95E9DD8DE2690C1E65E2A4198E5C5AC6E6D3|yrvD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27630 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTCTTTTCCCCCAAAC, downstream forward: _UP4_TAGTTTTCGAATATTATTTG
  • GP2713 (''[gene|4AF865F1E16187F89C1FE19BAE5C2CF2C0A53E4A|yrvC]-[gene|418A95E9DD8DE2690C1E65E2A4198E5C5AC6E6D3|yrvD]''::''cat''), available in [SW|Jrg Stlke]'s lab

    • FLAG-tag construct

  • GP2440 ''yrvD-3xFLAG spc'' (based on [SW|pGP1331]), available in [SW|Jrg Stlke]'s lab

    • References

  • 15241682